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Creators/Authors contains: "Shahid, Saima"

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  1. Summary Microbial nitrogen (N) fixation accounts forc. 97% of natural N inputs to terrestrial ecosystems. These microbes can be free‐living in the soil and leaf litter (asymbiotic) or in symbiosis with plants. Warming is expected to increase N‐fixation rates because warmer temperatures favor the growth and activity of N‐fixing microbes.We investigated the effects of warming on asymbiotic components of N fixation at a field warming experiment in Puerto Rico. We analyzed the function and composition of bacterial communities from surface soil and leaf litter samples.Warming significantly increased asymbiotic N‐fixation rates in soil by 55% (to 0.002 kg ha−1 yr−1) and by 525% in leaf litter (to 14.518 kg ha−1 yr−1). This increase in N fixation was associated with changes in the N‐fixing bacterial community composition and soil nutrients.Our findings suggest that warming increases the natural N inputs from the atmosphere into this tropical forest due to changes in microbial function and composition, especially in the leaf litter. Given the importance of leaf litter in nutrient cycling, future research should investigate other aspects of N cycles in the leaf litter under warming conditions. 
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    Free, publicly-accessible full text available October 8, 2026
  2. Within the life cycle of a living organism, another life cycle exists for the selfish genome inhabitants, which are called transposable elements (TEs). These mobile sequences invade, duplicate, amplify, and diversify within a genome, increasing the genome's size and generating new mutations. Cells act to defend their genome, but rather than permanently destroying TEs, they use chromatin-level repression and epigenetic inheritance to silence TE activity. This level of silencing is ephemeral and reversible, leading to a dynamic equilibrium between TE suppression and reactivation within a host genome. The coexistence of the TE and host genome can also lead to the domestication of the TE to serve in host genome evolution and function. In this review, we describe the life cycle of a TE, with emphasis on how epigenetic regulation is harnessed to control TEs for host genome stability and innovation. 
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